{"id":630,"date":"2016-05-31T14:19:01","date_gmt":"2016-05-31T12:19:01","guid":{"rendered":"http:\/\/vm-bioinfo-wp.toulouse.inra.fr\/?page_id=630"},"modified":"2020-07-29T10:40:32","modified_gmt":"2020-07-29T08:40:32","slug":"default_resources_faq","status":"publish","type":"page","link":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/faq\/default_resources_faq\/","title":{"rendered":"Default resources"},"content":{"rendered":"<h6>SLURM Cluster<\/h6>\n<h6><\/h6>\n\t\t\t\t\t\t<style>\r\n\t\t\t\t\t#wpsm_accordion_2592 .wpsm_panel-heading{\r\npadding:0px !important;\r\n}\r\n#wpsm_accordion_2592 .wpsm_panel-title {\r\nmargin:0px !important; \r\ntext-transform:none !important;\r\nline-height: 1 !important;\r\n}\r\n#wpsm_accordion_2592 .wpsm_panel-title a{\r\ntext-decoration:none;\r\ncolor:#000000 !important;\r\nfont-size:14px !important;\r\ndisplay:block;\r\npadding:0px;\r\nfont-family: Sans !important;\r\npadding-top: 10px;\r\npadding-bottom: 10px;\r\nborder-bottom:1px solid  #ddd !important;\r\n\r\n}\r\n#wpsm_accordion_2592 .wpsm_panel-title a:hover,#wpsm_accordion_2592 .wpsm_panel-title a:visited, #wpsm_accordion_2592 .wpsm_panel-title a:focus {\r\n\tcolor:#000000 !important;\r\n}\r\n#wpsm_accordion_2592 .acc-a{\r\n\tcolor: #000000 !important;\r\n\tbackground-color:#ffffff !important;\r\n\tborder-color: #ddd;\r\n}\r\n#wpsm_accordion_2592 .wpsm_panel-default > .wpsm_panel-heading{\r\n\tcolor: #000000 !important;\r\n\tbackground-color: #ffffff !important;\r\n\tborder-color: #ffffff !important;\r\n\tborder-top-left-radius: 0px;\r\n\tborder-top-right-radius: 0px;\r\n}\r\n#wpsm_accordion_2592 .wpsm_panel-default {\r\n\t\r\n\tborder:1px solid transparent !important;\r\n\r\n\t}\r\n#wpsm_accordion_2592 {\r\n\tmargin-bottom: 20px;\r\n\toverflow: hidden;\r\n\tfloat: left;\r\n\twidth: 100%;\r\n\tdisplay: block;\r\n}\r\n#wpsm_accordion_2592 .ac_title_class{\r\n\tdisplay: inline-block;\r\n    padding-top: 5px;\r\n    padding-bottom: 5px;\r\n    padding-left: 13px;\r\n    padding-right: 10px;\r\n    border: 0px solid #ddd;\r\n\tfont-size:14px !important;\r\nfont-family: Sans !important;\r\n\t\r\n\r\n}\r\n#wpsm_accordion_2592  .wpsm_panel {\r\n\toverflow:hidden;\r\n\t-webkit-box-shadow: 0 0px 0px rgba(0, 0, 0, .05);\r\n\tbox-shadow: 0 0px 0px rgba(0, 0, 0, .05);\r\n\t\r\n\t\tborder-radius: 4px;\r\n\t}\r\n#wpsm_accordion_2592  .wpsm_panel + .wpsm_panel {\r\n\t\tmargin-top: 5px;\r\n\t}\r\n#wpsm_accordion_2592  .wpsm_panel-body{\r\nbackground-color:#ffffff !important;\r\ncolor:#000000 !important;\r\nborder-top-color: #ffffff !important;\r\nfont-size:12px !important;\r\nfont-family: Sans !important;\r\noverflow: hidden;\r\n\r\nborder: 0px solid #ddd !important;\r\n\r\nborder-top:0px !important;\r\npadding-left: 60px;\r\n}\r\n\r\n#wpsm_accordion_2592 .ac_open_cl_icon{\r\n\tbackground-color:#ffffff;\r\n\tcolor: #ba195c;\r\n\t\r\n     padding-top: 5px; \r\n     padding-bottom: 5px; \r\n\t margin-left:10px;\r\n    line-height: 1.0;\r\n    font-size:14px !important;\r\ntext-align: center !important;\r\n     width: 32px !important;\r\n    display: inline-block;\r\n\t\r\n\t\r\n}\r\n#wpsm_accordion_2592 .ac_open_cl_number{\r\n width: 25px !important;\r\n    display: inline-block;\r\n\t margin-left:10px;\r\n\t text-align: center !important;\r\n\t font-size:14px !important;\r\n\r\n}\r\n\r\n\t\t\t\r\n\t\t\t\t\r\n.entry h4 span {\r\n\r\ncolor: #ba195c;\r\n\r\n}\t\t\t\t\t\r\n\t\t\t<\/style>\r\n\t\t\t<div class=\"wpsm_panel-group\" id=\"wpsm_accordion_2592\" >\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse1\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tCluster available resources\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse1\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p><strong>48 broadwell nodes :<\/strong> node101... node148 (each 64 threads, 256GB of memory)<\/p>\r\n<p><strong>2 SMP nodes :<\/strong> genosmp02 (96 threads, 1.5TB of memory), genosmp03 (192 threads,3TB of memory<\/p>\r\n<p><strong>1 Visu node :<\/strong> genoview (64 threads,  128GB of memory, Graphic Card: Nvidia K40)<\/p>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse2\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tDisk spaces available\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse2\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p><strong>\/home\/user:<\/strong> 5GB available to store your configuration files.<br \/>\r\n <strong>\/work\/user:<\/strong> 1TB available as working directory. You have read\/write access from any cluster node. Files are automaticly deleted if they have not been accessed within the last 120 days (to know them: find repertoire\/ -atime +120).<br \/>\r\n <strong>\/save\/user:<\/strong> 250GB available for data you want to save with 30 retention days. You have read only access on this directory from any cluster nodes.<\/p>\r\n<p><br \/>\r\n If you need more space in \/work or in \/save you are invited to fill the resources <a href=\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/help\/resources-request\/\">request form<\/a>.<\/p>\r\n<p><br \/>\r\n <strong>\/usr\/local\/bioinfo\/src\/:<\/strong> directory gathering all bioinformatic\u00a0software (see <a href=\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/faq\/software_faq\/\">Software FAQ<\/a>)<br \/>\r\n <strong>\/bank:<\/strong> biological banks in different format (see <a href=\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/faq\/banks_faq\/\">Databanks FAQ<\/a>)<\/p>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse3\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tHow to get my disk quota and usage?\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse3\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p><strong>On \/work:<\/strong><\/p>\r\n<p><code>mmlsquota -u username --block-size G<\/code><\/p>\r\n<p><strong>On \/save and \/home:<\/strong><\/p>\r\n<p><code>du -csh --apparent-size \/save\/<em>username<\/em>\/<\/code> ( \/save\/<em>username<\/em>\/* for details)<br \/>\r\n<code>du -csh --apparent-size \/home\/<em>username<\/em>\/<\/code> ( \/home\/<em>username<\/em>\/* for details)<\/p>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse4\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tDefault CPU time\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse4\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p><strong>Academic account quota<\/strong>: 100 000 h\/per calendar year<br \/>\r\n Beyond these 100,000 hours, you will need to submit a science project (by the <a href=\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/help\/resources-request\/\">resources request form<\/a>) to estimate the real needs of the bioinformatics environment.<\/p>\r\n<p>According to results from this evaluation, but also their geographical and institutional origin, users can then either continue their treatments or be invited to contribute financially to infrastructure, or be redirected to regional or national m\u00e9socentres calculation.<\/p>\r\n<p><strong>Non-academic account quota<\/strong>: \u00a0500 h\/per calendar year for testing the infrastructure.<br \/>\r\n Overtime calculation will be charged (price on request).<\/p>\r\n<p>\u00a0<\/p>\r\n<p>To know your quota, use the command: <br \/>\r\n<code>squota_cpu<\/code><\/p>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse5\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tDefault job resource\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse5\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p>Without any parameters, on any queue, all jobs are limited to:<\/p>\r\n<ul>\r\n\t<li> 2GB (memory)<\/li>\r\n\t<li>1 CPU (thread)<\/li>\r\n<\/ul>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse6\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tCPU (threads) limitation rules\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse6\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p>It depends on the status of your Linux group (contributors, INRA and\/or REGION, others).<\/p>\r\n<p>\n<table id=\"tablepress-11\" class=\"tablepress tablepress-id-11\">\n<thead>\n<tr class=\"row-1 odd\">\n\t<th class=\"column-1\">Max slots<\/th><th class=\"column-2\">workq<br \/>\n(group)<\/th><th class=\"column-3\">workq<br \/>\n(user)<\/th><th class=\"column-4\">unlimitq<br \/>\n(all users sum)<\/th><th class=\"column-5\">unlimitq<br \/>\n(user)<\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr class=\"row-2 even\">\n\t<td class=\"column-1\">Contributors<\/td><td class=\"column-2\">5036<\/td><td class=\"column-3\">768<\/td><td class=\"column-4\">500<\/td><td class=\"column-5\">125<\/td>\n<\/tr>\n<tr class=\"row-3 odd\">\n\t<td class=\"column-1\">INRA\/Region<\/td><td class=\"column-2\">3780<\/td><td class=\"column-3\">576<\/td><td class=\"column-4\">500<\/td><td class=\"column-5\">94<\/td>\n<\/tr>\n<tr class=\"row-4 even\">\n\t<td class=\"column-1\">Others<\/td><td class=\"column-2\">1258<\/td><td class=\"column-3\">192<\/td><td class=\"column-4\">500<\/td><td class=\"column-5\">31<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/p>\r\n<p>To kown the status and the limits of your account:<\/p>\r\n<p><code>saccount_info\u00a0<em>login<\/em><\/code> (see \"Status of your Linux primary group in Slurm\" field)<\/p>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse7\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tMemory limitation rules\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse7\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p>It depends on the status of your Linux group (contributors, INRA and\/or REGION, others).<\/p>\r\n<p>\u00a0\n<table id=\"tablepress-14\" class=\"tablepress tablepress-id-14\">\n<thead>\n<tr class=\"row-1 odd\">\n\t<th class=\"column-1\">Max mem in G<\/th><th class=\"column-2\">workq<br \/>\n(group)<\/th><th class=\"column-3\">workq<br \/>\n(user)<\/th><th class=\"column-4\">unlimitq<br \/>\n(all users sum)<\/th><th class=\"column-5\">unlimitq<br \/>\n(user)<\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr class=\"row-2 even\">\n\t<td class=\"column-1\">Contributors<\/td><td class=\"column-2\">34T<\/td><td class=\"column-3\">4T<\/td><td class=\"column-4\">2T<\/td><td class=\"column-5\">500G<\/td>\n<\/tr>\n<tr class=\"row-3 odd\">\n\t<td class=\"column-1\">INRA\/Region<\/td><td class=\"column-2\">26T<\/td><td class=\"column-3\">3T<\/td><td class=\"column-4\">2T<\/td><td class=\"column-5\">376G<\/td>\n<\/tr>\n<tr class=\"row-4 even\">\n\t<td class=\"column-1\">Others<\/td><td class=\"column-2\">9T<\/td><td class=\"column-3\">1.5T<\/td><td class=\"column-4\">2T<\/td><td class=\"column-5\">124G<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/p>\r\n<p>To kown the status and the limits of your account:<\/p>\r\n<p><code>saccount_info <em>login<\/em><\/code> (see \"Status of your Linux primary group in Slurm\" field)<\/p>\r\n\r\n\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse8\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tJob number limitation rules\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse8\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p>\n<table id=\"tablepress-12\" class=\"tablepress tablepress-id-12\">\n<tbody class=\"row-hover\">\n<tr class=\"row-1 odd\">\n\t<td class=\"column-1\"><strong>Max jobs per user<\/strong><\/td><td class=\"column-2\">2500<\/td>\n<\/tr>\n<tr class=\"row-2 even\">\n\t<td class=\"column-1\"><strong>Max job for all users<\/strong><\/td><td class=\"column-2\">10000<\/td>\n<\/tr>\n<tr class=\"row-3 odd\">\n\t<td class=\"column-1\"><strong>Max task array per job<\/strong><\/td><td class=\"column-2\">2501<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/p>\r\n\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse9\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tMaxTime limitation rules\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse9\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t\n<table id=\"tablepress-16\" class=\"tablepress tablepress-id-16\">\n<thead>\n<tr class=\"row-1 odd\">\n\t<th class=\"column-1\">Slurm Partition<\/th><th class=\"column-2\">MaxTime<\/th>\n<\/tr>\n<\/thead>\n<tbody class=\"row-hover\">\n<tr class=\"row-2 even\">\n\t<td class=\"column-1\">workq<\/td><td class=\"column-2\">96H (4 days)<\/td>\n<\/tr>\n<tr class=\"row-3 odd\">\n\t<td class=\"column-1\">interq<\/td><td class=\"column-2\">48H (2 days)<\/td>\n<\/tr>\n<tr class=\"row-4 even\">\n\t<td class=\"column-1\">unlimitq, smpq<\/td><td class=\"column-2\">180 days (6 months)<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t\r\n\t\t\t\t  <!-- Inner panel Start -->\r\n\t\t\t\t  <div class=\"wpsm_panel wpsm_panel-default\">\r\n\t\t\t\t\t<div class=\"wpsm_panel-heading\" role=\"tab\" >\r\n\t\t\t\t\t  <h4 class=\"wpsm_panel-title\">\r\n\t\t\t\t\t\t<a  class=\"collapsed\"  data-toggle=\"collapse\" data-parent=\"#wpsm_accordion_2592 \" href=\"#ac_2592_collapse10\"  >\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span  class=\"ac_open_cl_icon fa fa-plus\"><\/span>\r\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"ac_title_class\">\r\n\t\t\t\t\t\t\t\tUseful scripts\/alias\t\t\t\t\t\t\t<\/span>\r\n\t\t\t\t\t\t<\/a>\r\n\t\t\t\t\t  <\/h4>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t\t<div id=\"ac_2592_collapse10\" class=\"wpsm_panel-collapse collapse_2592 collapse \"  >\r\n\t\t\t\t\t  <div class=\"wpsm_panel-body\">\r\n\t\t\t\t\t\t<p><strong>Useful account informations<\/strong><\/p>\r\n<p><code>saccount_info <em>login<\/em><\/code> command will give you some useful informations of your account like:<\/p>\r\n<ul>\r\n\t<li>account expiration date and last password change date ( every year)<\/li>\r\n\t<li>your primary Linux group<\/li>\r\n\t<li><span id=\"result_box\" class=\"short_text\" lang=\"en\"><span class=\"\">your secondary Linux groups if you have some<br \/>\r\n <\/span><\/span><\/li>\r\n\t<li>status of your Linux primary group in Slurm (contributors, inraregion or others)<\/li>\r\n\t<li>your groups' members<\/li>\r\n\t<li>some Slurm limitations of your account<\/li>\r\n<\/ul>\r\n<p><strong>squeue long format<\/strong><\/p>\r\n<p><code>sq_long<\/code> : squeue verbose with detail for: JOBID NAME USER QOS PARTITION NODES CPUS MIN_MEMORY TIME_LIMIT TIME_LEFT STATE NODELIST REASON. Can take all squeue options. See --help option for help.<\/p>\r\n<p><code>sq_debug<\/code> : squeue verbose for debug. Show COMMAND and WORKDIR for a job. Can take all squeue options. See --help option for help.<\/p>\r\n<p><code>sq_run<\/code> : sq_debug for running jobs.\u00a0Can take all squeue options. See --help option for help.<\/p>\r\n<p><code>sq_pend<\/code> : sq_debug for pending jobs.\u00a0Can take all squeue options. See --help option for help.<\/p>\r\n<p><strong>sacct long format<\/strong><\/p>\r\n<p><code>sa_debug<\/code> : sacct verbose. Can take all sacct options. See --help option for help.<\/p>\t\t\t\t\t  <\/div>\r\n\t\t\t\t\t<\/div>\r\n\t\t\t\t  <\/div>\r\n\t\t\t\t   <!-- Inner panel End -->\r\n\t\t\t\t\r\n\t\t\t\t\t\t<\/div>\r\n\t\t\t\t<script>\r\n\tjQuery(document).ready(function() {\r\n\t\t\r\n\t\t\tjQuery('.collapse_2592').on('shown.bs.collapse', function(){jQuery(this).parent().find(\".fa-plus\").removeClass(\"fa-minus\").addClass(\"fa-minus\"); jQuery(this).parent().find(\".wpsm_panel-heading\").addClass(\"acc-a\"); }).on('hidden.bs.collapse', function(){jQuery(this).parent().find(\".fa-minus\").removeClass(\"fa-minus\").addClass(\"fa-plus\"); jQuery(this).parent().find(\".wpsm_panel-heading\").removeClass(\"acc-a\");});\r\n\t\t\r\n\t\t});\r\n\t<\/script>\r\n\t\t\n","protected":false},"excerpt":{"rendered":"<p>SLURM Cluster<\/p>\n","protected":false},"author":5,"featured_media":0,"parent":848,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"page-templates\/child-menu.php","meta":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v20.2 - 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