{"id":41,"date":"2016-05-04T10:12:18","date_gmt":"2016-05-04T08:12:18","guid":{"rendered":"http:\/\/vm-bioinfo-wp.toulouse.inra.fr\/?page_id=41"},"modified":"2021-12-21T11:44:54","modified_gmt":"2021-12-21T10:44:54","slug":"2010-2","status":"publish","type":"page","link":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/","title":{"rendered":"2010"},"content":{"rendered":"<ul>\n<li style=\"text-align: justify;\">Servin B, de Givry S, Faraut T. Statistical confidence measures for genomemaps: application to the validation of genome assemblies. Bioinformatics. 2010 Dec 15;26(24):3035-42.<a href=\"http:\/\/bioinformatics.oxfordjournals.org\/content\/26\/24\/3035.long\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Oulion S, Debiais-Thibaud M, d&#8217;Aubenton-Carafa Y, Thermes C, Da Silva C, Bernard-Samain S, Gavory F, Wincker P, Mazan S, Casane D. Evolution of Hox gene clusters in gnathostomes: insights from a survey of a shark\u00a0 (Scyliorhinus canicula) transcriptome. Mol Biol Evol. 2010 Dec;27(12):2829-38. <a href=\"http:\/\/mbe.oxfordjournals.org\/content\/27\/12\/2829.long\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\"><strong>Gaspin C<\/strong>, Rami JF, Lescurre B. Distribution of short interstitial telomere motifs in plant genomes. BMC Plant Biology 2010, 10:283doi:10.1186\/1471-2229-10-283 <a href=\"http:\/\/www.biomedcentral.com\/1471-2229\/10\/283\" target=\"Opens\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Legarra A, Robert-Grani\u00e9 C, Croiseau P, Guillaume F, Fritz S. Improved Lasso for genomic selection. Genet Res 2010 D\u00e9c;:1-11 <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21144129\" target=\"Opens\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Ueno S, Le Provost G, Leger V, <strong>Klopp C<\/strong>, <strong>Noirot C<\/strong>, Frigerio J, Salin F, Salse J, Abrouk M, Murat F, Brendel O, Derory J, Abadie P, Leger P, Cabane C, Barre A, de Daruvar A, Couloux A, Wincker P, Reviron M, Kremer A, Plomion C. Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak. BMC Genomics 2010;11(1):650.<a href=\"http:\/\/www.biomedcentral.com\/1471-2164\/11\/650\" target=\"Opens\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Lena Tasse, Juliette Bercovici, Sandra Pizzut-Serin, Patrick Robe, Julien Tap, <strong>Christophe Klopp<\/strong>, Brandi L. Cantarel, Pedro M. Coutinho, Bernard Henrissat, Marion Leclerc, Jo\u00ebl Dor\u00e9, Pierre Monsan, Magali Remaud-Simeon and Gabrielle Potocki-Veronese.Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes.\u00a0 Genome Research. 2010. <a href=\"http:\/\/genome.cshlp.org\/content\/early\/2010\/09\/14\/gr.108332.110.abstract\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Leroux, S. Feve, K. Vignoles, F. Bouchez, O. <strong>Klopp, C. Noirot, C<\/strong>. Gourichon, D. Richard, S. Leterrier, C. Beaumont, C. Minvielle, F. Vignal, A. Pitel, F. Non PCR-amplified Transcripts and AFLP fragments as reduced representations of the quail genome for 454 Titanium sequencing. BMC Res Notes 2010\/3\/214 <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC2919564\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Rafael Pont-Lezica, Zoran Minic, David Roujol, H\u00e9l\u00e8ne San Clemente, Elisabeth Jamet Plant cell wall functional genomics: Novelties from proteomics Advances in Genetics, volume 1, MA Osborne (Ed.) (2010) chapter 10 <a href=\"http:\/\/hal.archives-ouvertes.fr\/hal-00485293\/\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Beaume, M., Hernandez, P., Farinelli, L., Deluen, C., Linder, P., <strong>Gaspin, C.<\/strong>, Romby, P., Schrenzel, J., Francois, P. Cartography of Methicillin-Resistant S. aureus Transcripts: Detection, Orientation and Temporal Expression during Growth Phase and Stress ConditionsP., PLoS ONE 5(5): e10725. doi:10.1371\/journal.pone.0010725. <a href=\"http:\/\/www.plosone.org\/article\/info%3Adoi%2F10.1371%2Fjournal.pone.0010725\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Jaulneau, V., Lafitte, C., Jacquet, C., Fournier, S., Salamagne, S., Briand,X., Esquerr\u00e9-Tugay\u00e9, M.T., Dumas, B. (2010) Ulvan, a sulfated polysaccharide from green algae, activates plant immunity through the jasmonic acid signaling pathway. J. Biomed. Biotechnol. <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC2860583\/\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro, C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS,Schuster SC, Carlson JE, Sallet E, Schiex T, Dievart A, Kramer M, Gelley L, Shi Z, B\u00e9rard A, Viot C, Boccara M, Risterucci AM, Guignon V, Sabau X, Axtell MJ, Ma Z, Zhang Y, Brown S, Bourge M, Golser W, Song X, Clement D, Rivallan R, Tahi M, Akaza JM, Pitollat B, Gramacho K, D&#8217;Hont A, Brunel D, Infante D, Kebe I, Costet P, Wing R, McCombie WR, Guiderdoni E, Quetier F, Panaud O, Wincker P, Bocs S, Lanaud C. The genome of Theobroma cacao. Nat Genet. 2010 Dec 26. <a href=\"http:\/\/www.nature.com\/ng\/journal\/vaop\/ncurrent\/full\/ng.736.html\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<li style=\"text-align: justify;\">David Allouche, Simon de Givry and Thomas Schiex. Towards Parallel Non Serial Dynamic Programming for Solving Hard Weighted CSP. Lecture Notes in Computer Science, 2010, Volume 6308\/2010, 53-60, DOI: 10.1007\/978-3-642-15396-9_7 <a href=\"http:\/\/www.springerlink.com\/content\/x414kt6q82615ur2\/\" target=\"_blank\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Servin B, de Givry S, Faraut T. Statistical confidence measures for genomemaps: application to the validation of genome assemblies. Bioinformatics. 2010 Dec 15;26(24):3035-42.see Oulion S, Debiais-Thibaud M, d&#8217;Aubenton-Carafa Y, Thermes C, Da Silva C,&#46;&#46;&#46;<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":21,"menu_order":10,"comment_status":"closed","ping_status":"closed","template":"page-templates\/child-menu.php","meta":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v20.2 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>2010 - genotoul-bioinfo-UPDATE<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/\",\"url\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/\",\"name\":\"2010 - genotoul-bioinfo-UPDATE\",\"isPartOf\":{\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#website\"},\"datePublished\":\"2016-05-04T08:12:18+00:00\",\"dateModified\":\"2021-12-21T10:44:54+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"About us\",\"item\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Publications\",\"item\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/\"},{\"@type\":\"ListItem\",\"position\":4,\"name\":\"2010\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#website\",\"url\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/\",\"name\":\"genotoul-bioinfo-UPDATE\",\"description\":\"\",\"publisher\":{\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#organization\"},\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/?s={search_term_string}\"},\"query-input\":\"required name=search_term_string\"}],\"inLanguage\":\"en-US\"},{\"@type\":\"Organization\",\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#organization\",\"name\":\"genotoul-bioinfo-UPDATE\",\"url\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/\",\"logo\":{\"@type\":\"ImageObject\",\"inLanguage\":\"en-US\",\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#\/schema\/logo\/image\/\",\"url\":\"\",\"contentUrl\":\"\",\"caption\":\"genotoul-bioinfo-UPDATE\"},\"image\":{\"@id\":\"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#\/schema\/logo\/image\/\"}}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"2010 - genotoul-bioinfo-UPDATE","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/","schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"WebPage","@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/","url":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/","name":"2010 - genotoul-bioinfo-UPDATE","isPartOf":{"@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#website"},"datePublished":"2016-05-04T08:12:18+00:00","dateModified":"2021-12-21T10:44:54+00:00","breadcrumb":{"@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/#breadcrumb"},"inLanguage":"en-US","potentialAction":[{"@type":"ReadAction","target":["https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/2010-2\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/"},{"@type":"ListItem","position":2,"name":"About us","item":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/"},{"@type":"ListItem","position":3,"name":"Publications","item":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/about-us\/publications-2-2-2\/"},{"@type":"ListItem","position":4,"name":"2010"}]},{"@type":"WebSite","@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#website","url":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/","name":"genotoul-bioinfo-UPDATE","description":"","publisher":{"@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#organization"},"potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/?s={search_term_string}"},"query-input":"required name=search_term_string"}],"inLanguage":"en-US"},{"@type":"Organization","@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#organization","name":"genotoul-bioinfo-UPDATE","url":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/","logo":{"@type":"ImageObject","inLanguage":"en-US","@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#\/schema\/logo\/image\/","url":"","contentUrl":"","caption":"genotoul-bioinfo-UPDATE"},"image":{"@id":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/#\/schema\/logo\/image\/"}}]}},"_links":{"self":[{"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/pages\/41"}],"collection":[{"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/comments?post=41"}],"version-history":[{"count":2,"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/pages\/41\/revisions"}],"predecessor-version":[{"id":19147,"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/pages\/41\/revisions\/19147"}],"up":[{"embeddable":true,"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/pages\/21"}],"wp:attachment":[{"href":"https:\/\/vm-bioinfo-wp.toulouse.inrae.fr\/genotoul_test_update\/index.php\/wp-json\/wp\/v2\/media?parent=41"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}